AceView | Tool name | AceView |
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| URL | http://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/index.html |
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| Important features | |
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| Citations | Thierry-Mieg D, Thierry-Mieg J. AceView: a comprehensive cDNA-supported gene
and transcripts annotation. Genome Biol. 2006;7 Suppl 1:S12.1-14. Epub 2006 Aug
7. PubMed PMID: 16925834; PubMed Central PMCID: PMC1810549.
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| Year of publication | 2006 |
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| Rank by usage frequency | 100 |
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| Comments | Compact Gene diagram is shown as an output, which marks the exon length. Number of cDNA's supporting each intron, good proteins, partial or not good proteins are also marked. |
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| Function | Exon detail, Exon detail: number, Exon detail: start/end, Exon detail: sequence, Exon detail: length, Exon detail direct information, Intron detail, Intron detail: start/end, Intron detail: sequence, Intron detail: length, BLAST, Expression information, Species, Finds alternative splicing in human, Finds alternative splicing in rat, Finds alternative splicing in mouse, Finds alternative splicing in Arabidopsis, Finds alternative splicing in other species |
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| Category | |
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| Input file format | gene or protein name, a LocusLink name or an alias symbol or a LocusID, a clone name, an mRNA or EST sequence accession ,a meaningful expression, a gene ontology term |
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| Output file format | Textual information, along with graphical and tabular format is given. |
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| Limitation | |
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